Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015826295.1_cds_XP_016502618.1_16239
CDS Infomation	[gene=LOC107820791] [db_xref=GeneID:107820791] [protein=LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase LIN-1] [exception=unclassified translation discrepancy] [protein_id=XP_016502618.1] [location=join(61283..62220,62386..62446,62563..62934,63018..63085,63160..64443,64596..64740,64819..65076,65166..65475,65561..65685,65771..65890,65977..66108,66476..66598,66747..66785,66787..66858,67027..67170,67269..67520,67602..67619)] [gbkey=CDS]
Sequence	ATGGCTGGAAATTACATGTTTGAAATGGATCAAGAAGACATAGTTAGGTCCTTGATCACA GCTGTTGGTAGTTTCATTCAAGATAGGCTTATTGATAAAGAACAAAGAACCTTGCATAAA GAACAATGTGCTGAGAGGTTAGCAGCTGAAGATGGGAACTCTGATAAAGACACAGAAGTT CGATACTCTGATCAAGCAGTTTTAGCCAATTTGGACTGGGGAATTGATGCCCTTGAAGAA GCAATCAACACATCAAACATTGAAACTAAGATGGCTAGACTAGACTACGCCGAAAAAATG CTGCAAGTTTGTGCAATGTTGGATTCTAATCAGAAAACTGCAGGGGTCCCTAATTTCTAT CTCTCTGCTTGGGCTCATTTAAACCTTTCTTACTTATGGAAGTTGAGAAATAATGTTCAC AATGCAGTACTTCATATCTTGGAGATGTTTACTGTTGACCCTTTCTTCTCGCGGATAGAT TTTGCACCTGAGCTATGGAAAAGTTTGTTTGTTCCACACATGAGCTCCATCGTCGGGTGG TACTCAGAGGAGAGACATCGGATAGTGATGGATGTTATTCCTGATTCAAGTGACTTGTCT TTCACTATGGATTTTGATCATGATTTTAATGAATCTTTGATATTTTCTGTAAGGCCTGAT CAAGCTGAGAAAATGCAGAAAGTCGAGCAGCTTTATGGACAGTCATTGGATGAGAACACA AGGCTTTATGCAAAATACTATAAGGACTGTATAAACTATGATTCTGCAACTTCAAAGAAG GCAATTCCTCTGTTGCCAATCGCAGAGCCACCGATGACTCCATTGCATGAAGTATGCCGG TCAATTCCTGATTATGTCAAATTTGGCCCAATATTGCCTAAGAGTGCCGGGTTTACTCCT ATTCTGAGAGTCAAGGAGAATGCAAATGGAGCCTCAAGATTGAAAATGGCTTCTTCGTCG TCTGAGAATCAGGAGGACTCCACGACTTGGGATCCACTAAAAGGAATACCTGAGGTGGAT GAAGAAGATTATGACCCCGAGCCTCATGTATACACTACATCGAATAAAAGGAATCAAGAA AACAATTCATCCTATTGTAGTGGAGTGAATAAGGATGTAGAAGCCAGGTCCAAAGTCAAG CAAATTAATACAAACCAAAGACAATCTCCTAAGTCCTTCCCTTCAATGGACTTCCCTAAA CTGGAGTCCCCTAAAGCTCCTTCACCAAAAGGATCAGATACTCCCTCGAAGAAAGGTGTA CCTGTGTTACGCCTCTTGTCTGGACGTGTTAAGGACACCTCAAGTTCTATTTCTTTGCAT TCATCCCAAGAGTTAAAAATTAGCTCAGCAGACTCGGATGAAGAAAGGACAGAGCAGCAT GAAACTGTAAGGAAAAGAAATGCCCAAAGGCGGAGCCTTAGTCAATCCATAGAAAAAGGC TCTCCGATTTATAGTGATGAAGGAAGTCACAGCTGCATTTCTCTCCCATTGTCGGATAAG TCGACTGCTCCATCAAGGCCACCTAAAGATTTTGTCTGTCCGATAACTGGACAAATATTT AATGATCCTGTCACCCTTGAAACCGGTCAAACATATGAAAGGAAAGCCATCCAAGAATGG ATGAATAGAGGCAATACAACATGCCCCATTACAAGGCAGTCTTTATCTGCTTCTACTCTT CCTAAAGCAAACTATGTCCTAAAGAGACTGATAACCTCTTGGAGAGAACAGCACCCTGAC CTAGCACAGGATTTTTCTTACTCTGAAACACCAAGAAGTTATTTAAGCATTCCCTCTTCA AGAGAGAGGTCATCTGAATCTACTCCATCTCCGACATTTAATCATCCCAATCATAGGCGG ATAGAGGAAATCATGGAACAAAGATCACGAAGATTTATGCGAGCAGCTGTATCTATGTCA CCTACAAGTGTAATTTCTCAAGCAGCAACTGAAGCAATTATCAACGGCTTAAAACCTTAT GTTTCATGTCTATGCACTTCAGAGGACTTACAAGAATGTGAACAAGCCATATTGACTATA GCAAAGATATGGGGTGACTCGAAACTTGAATCTCAAGGAGTTCACTCCTATTTATCTGCA CCAACAATTGTGAACGGATTTGTAGAGGTATTATCAGCTTCCCAAAAGAGGGAAGTTTTA AGGACGACAATTTATATTTTGTCCGAGCTATTATATGCAGAGGATAGTGTTGGTGAGATC CTCACAAGCGTGGACTCGGATTTTGAATGCCTAGCTACTTTATTAAAAGATGGTCTTGCT GAAGCAGCGGTTCTTATTTACCTACTCAGGCCATCATTCTCTCAACTTTCGGCTCATAAT TTTGTACCCTCTCTTACTCAGATTATCTCAAACAGAAGTGAGGATTCTGGTGATTTTCAG TTCACAATCGGACCAAAGGATGCCTCTGTTGTGTTGCTCGAGCAAATTATTACTGGAGGA GGTGAGAGCGATCAATCATTCAATGCTATGCAGATTATATCAGGAAATGGTATTCTTGCC TTGCTCAAGTGCCTAGAACATGAAAATGGAAGAGAGTCCATTGTATGCATACTTTTATGC TGTATTCGGGCTGATACGAGTTGCAGAAATACAGTAGCTAGTAGAATTGAGTTGTCTCCT GTTCTTGAGTTAATTCACACTGGAAGTGATAGCGTGAAAGCCACATGCATAGAACTTCTT TATGAGTTAGTTTTATTAAGCAGGAGAACATTGTGCAACCAGATTCTGCAGATAATTAAG GACGAGGGAGCATTTAGTACAATGCACACTCTTCTTGTCTCTCTACAGATGGCTTCAGTG GAGCAGAAATCTACCATTGCTCCTCTTCTTCTGCAGCTTGACCTTCTGGTTGAGCCTCGA AAAATGAGCATATACCGGGAAGAATCAATAGAGGCATTGATTGAAGCACTTCACAAAAAG GACTTCCCCGCATCTCAGCTCAGGGCTCTTGATGCCTTGTTATCTCTTTCTGGGCATCTA ACTAACTCTGGTAAGTCCTTTCTTGAAGCTCGGCTGCTCAAGATTGCGGGATTTAATCAG CGTTATAATGCCACGATGAAAGAAGAGAGGCAAAAAGCAGGTGAAAATGACACCACCAAT ATAATGGAAGAGGAAGAAAAAGCGCTGAGTTCTTGGGAAAATAGAACAGCTTTTGTTCTT TGCAACCATGAGAAAGGATTAGTATTCAGAGCTTTAGAGAAATGCCTTAAGAGCACCTCA ATGGAGATAGCAAAATCTTCCTTTATTGTAGCCACATGGCTAATTCACATGCTCTATAAT TTTCCCGATACTGGAATTCGAGATGTTGCTCGTAAGTCCTTGCTCGAGCAATTTATACAG ATGCTCCAGTCGACAAAGAATATCGAGGAGAAGATCTTGGCAGCTCTTGCTTTGAGAGGC TTTATTACTGATTTAGGTGCACTCAGCGAACTGGGAATATATGCCAAATGTTTATGCAAA AGCTTGAGGAAACTTAAAAAGTACTCTGTAGTGGTCAGTGATATAATGAAAACCCTGATG AACTTGCCATGTATTGATGCTGCAGAATTATGGTGCTATTCTGAATGTCCTGAGGTGGAT GTGTCAATGAATGGAGAAGTTCTTTGTCTGCTCCACATAAGGGGTCGGCTCATTAGCAGT CATTCTGATGGAACCATTAAGGTCTGGGAAACTGGAAAAAGAGCGCCTCGGTTAATTCAT GAAACGCGTGAGCACACAAAGGCTGTTACATGCCTTTATGTTTCATCTTCATATGAGAAA CTGTATAGCGGTTCCTTGGACAGAACAATCCGGGTTTGGGCAATCAATCAAGAGGAAATC CACTGTCTTCAGGTTCATGATGTGAAAGAGCCTGTGCTTGAGTTGATAGCTAACACTCAT TTTGCATGCTTCGCATCTCAAGCGACAGGAGTTAAGGTTTATACTTGGTCAGGGGTTCCC AAGCATGTAAACTTCAAAAAATATGTCAAGTGCCTTGCCATTATGGGCGATAAACTTTAT TGCGGATGCACAGGTTATAGTATCCAGGAAGTTGATTTAAGCTCTCAAACATCAACAGCA TTTTATGCTGGTGCCAAGAAGTTGTTGGGAAAACAGAATATCTATTCCCTCCAAATTCAA AAAAATGTTGTGTTTGCTGGTGGTTCCTTAGTTGATGGAATATCCGGAAAGGTATTTTCT CTCCCTAGCAAGGCAGTCATTGGATCACTTTCAACCTGTTCAGACATCCAACGACTAGCA GTAAACAACGATTTCATATTTTCTGCCACAAAATCTGGCACCATAGAGGTATGGCTGCAA GAAAGAGTTACAAAGATCACTTCCATTAAGATGAAAAGTGGCGGACAGACTAAAATTACA TCTTTAGCTGTGGATAAAGATGGTGAAATGATATTTGCTGGTTCTACTGATGGAAAAATT CAGGCTTGGCGTTTGGATTAA

Peptide Sequence

PEP ID	XP_016502618.1
PEP Infomation	PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase LIN-1 [Nicotiana tabacum]
Sequence	MAGNYMFEMDQEDIVRSLITAVGSFIQDRLIDKEQRTLHKEQCAERLAAEDGNSDKDTEV RYSDQAVLANLDWGIDALEEAINTSNIETKMARLDYAEKMLQVCAMLDSNQKTAGVPNFY LSAWAHLNLSYLWKLRNNVHNAVLHILEMFTVDPFFSRIDFAPELWKSLFVPHMSSIVGW YSEERHRIVMDVIPDSSDLSFTMDFDHDFNESLIFSVRPDQAEKMQKVEQLYGQSLDENT RLYAKYYKDCINYDSATSKKAIPLLPIAEPPMTPLHEVCRSIPDYVKFGPILPKSAGFTP ILRVKENANGASRLKMASSSSENQEDSTTWDPLKGIPEVDEEDYDPEPHVYTTSNKRNQE NNSSYCSGVNKDVEARSKVKQINTNQRQSPKSFPSMDFPKLESPKAPSPKGSDTPSKKGV PVLRLLSGRVKDTSSSISLHSSQELKISSADSDEERTEQHETVRKRNAQRRSLSQSIEKG SPIYSDEGSHSCISLPLSDKSTAPSRPPKDFVCPITGQIFNDPVTLETGQTYERKAIQEW MNRGNTTCPITRQSLSASTLPKANYVLKRLITSWREQHPDLAQDFSYSETPRSYLSIPSS RERSSESTPSPTFNHPNHRRIEEIMEQRSRRFMRAAVSMSPTSVISQAATEAIINGLKPY VSCLCTSEDLQECEQAILTIAKIWGDSKLESQGVHSYLSAPTIVNGFVEVLSASQKREVL RTTIYILSELLYAEDSVGEILTSVDSDFECLATLLKDGLAEAAVLIYLLRPSFSQLSAHN FVPSLTQIISNRSEDSGDFQFTIGPKDASVVLLEQIITGGGESDQSFNAMQIISGNGILA LLKCLEHENGRESIVCILLCCIRADTSCRNTVASRIELSPVLELIHTGSDSVKATCIELL YELVLLSRRTLCNQILQIIKDEGAFSTMHTLLVSLQMASVEQKSTIAPLLLQLDLLVEPR KMSIYREESIEALIEALHKKDFPASQLRALDALLSLSGHLTNSGKSFLEARLLKIAGFNQ RYNATMKEERQKAGENDTTNIMEEEEKALSSWENRTAFVLCNHEKGLVFRALEKCLKSTS MEIAKSSFIVATWLIHMLYNFPDTGIRDVARKSLLEQFIQMLQSTKNIEEKILAALALRG FITDLGALSELGIYAKCLCKSLRKLKKYSVVVSDIMKTLMNLPCIDAAELWCYSECPEVD VSMNGEVLCLLHIRGRLISSHSDGTIKVWETGKRAPRLIHETREHTKAVTCLYVSSSYEK LYSGSLDRTIRVWAINQEEIHCLQVHDVKEPVLELIANTHFACFASQATGVKVYTWSGVP KHVNFKKYVKCLAIMGDKLYCGCTGYSIQEVDLSSQTSTAFYAGAKKLLGKQNIYSLQIQ KNVVFAGGSLVDGISGKVFSLPSKAVIGSLSTCSDIQRLAVNNDFIFSATKSGTIEVWLQ ERVTKITSIKMKSGGQTKITSLAVDKDGEMIFAGSTDGKIQAWRLD

Transcript Sequence

Gene sequence data has not been registered.